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Toni Hermoso Pulido
Toni Hermoso Pulido
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Title
Cited by
Cited by
Year
An atlas of alternative splicing profiles and functional associations reveals new regulatory programs and genes that simultaneously express multiple major isoforms
J Tapial, KCH Ha, T Sterne-Weiler, A Gohr, U Braunschweig, ...
Genome research 27 (10), 1759-1768, 2017
2122017
LncATLAS database for subcellular localization of long noncoding RNAs
D Mas-Ponte, J Carlevaro-Fita, E Palumbo, TH Pulido, R Guigo, ...
Rna 23 (7), 1080-1087, 2017
1652017
Whole genome sequencing of turbot (Scophthalmus maximus; Pleuronectiformes): a fish adapted to demersal life
A Figueras, D Robledo, A Corvelo, M Hermida, P Pereiro, JA Rubiolo, ...
DNA research 23 (3), 181-192, 2016
1412016
A novel subfamily of mouse cytosolic carboxypeptidases
E Kalinina, R Biswas, I Berezniuk, A Hermoso, FX Aviles, LD Flicker
The FASEB Journal 21 (3), 836-850, 2007
1392007
GREENC: a Wiki-based database of plant lncRNAs
AP Gallart, AH Pulido, IAM de Lagrán, W Sanseverino, RA Cigliano
Nucleic acids research 44 (Database issue), D1161, 2016
1092016
Nnal‐like proteins are active metallocarboxypeptidases of a new and diverse M14 subfamily
MR dela Vega, RG Sevilla, A Hermoso, J Lorenzo, S Tanco, A Diez, ...
The FASEB Journal 21 (3), 851-865, 2007
1082007
PRGdb 2.0: towards a community-based database model for the analysis of R-genes in plants
W Sanseverino, A Hermoso, R D’Alessandro, A Vlasova, G Andolfo, ...
Nucleic acids research 41 (D1), D1167-D1171, 2012
1002012
GREENC: a Wiki-based database of plant lncRNAs
A Paytuví Gallart, A Hermoso Pulido, I Anzar Martínez de Lagrán, ...
Nucleic acids research 44 (D1), D1161-D1166, 2016
922016
ArchDB: automated protein loop classification as a tool for structural genomics
J Espadaler, N Fernandez‐Fuentes, A Hermoso, E Querol, FX Aviles, ...
Nucleic acids research 32 (suppl_1), D185-D188, 2004
852004
Scalable design of paired CRISPR guide RNAs for genomic deletion
C Pulido-Quetglas, E Aparicio-Prat, C Arnan, T Polidori, T Hermoso, ...
PLoS computational biology 13 (3), e1005341, 2017
682017
Citizen science charts two major “stomatotypes” in the oral microbiome of adolescents and reveals links with habits and drinking water composition
JR Willis, P González-Torres, AA Pittis, LA Bejarano, L Cozzuto, ...
Microbiome 6 (1), 1-17, 2018
542018
MyMpn: a database for the systems biology model organism Mycoplasma pneumoniae
JAH Wodke, A Alibés, L Cozzuto, A Hermoso, E Yus, M Lluch-Senar, ...
Nucleic acids research 43 (D1), D618-D623, 2015
352015
Bioinformatics and moonlighting proteins
S Hernández, L Franco, A Calvo, G Ferragut, A Hermoso, I Amela, ...
Frontiers in bioengineering and biotechnology 3, 90, 2015
292015
MasterOfPores: a workflow for the analysis of oxford nanopore direct RNA sequencing datasets
L Cozzuto, H Liu, LP Pryszcz, TH Pulido, A Delgado-Tejedor, ...
Frontiers in genetics 11, 211, 2020
252020
TrSDB: a proteome database of transcription factors
A Hermoso, D Aguilar, FX Aviles, E Querol
Nucleic acids research 32 (suppl_1), D171-D173, 2004
232004
SuperFly: a comparative database for quantified spatio-temporal gene expression patterns in early dipteran embryos
D Cicin-Sain, AH Pulido, A Crombach, KR Wotton, E Jiménez-Guri, ...
Nucleic Acids Research 43 (D1), D751-D755, 2015
192015
Can bioinformatics help in the identification of moonlighting proteins?
S Hernández, A Calvo, G Ferragut, L Franco, A Hermoso, I Amela, ...
Biochemical Society Transactions 42 (6), 1692-1697, 2014
122014
Hi-Cpipe: a pipeline for high-throughput chromosome capture
G Castellano, F Le Dily, M Beato, G Roma
72015
Including functional annotations and extending the collection of structural classifications of protein loops (ArchDB)
A Hermoso, J Espadaler, E Enrique Querol, FX Aviles, MJE Sternberg, ...
Bioinformatics and biology insights 1, 117793220700100004, 2007
72007
Pergola: boosting visualization and analysis of longitudinal data by unlocking genomic analysis tools
J Espinosa-Carrasco, I Erb, TH Pulido, J Ponomarenko, M Dierssen, ...
Iscience 9, 244-257, 2018
42018
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