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Xinjun Zhang
Xinjun Zhang
Dirección de correo verificada de indiana.edu
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miR2Disease: a manually curated database for microRNA deregulation in human disease
Q Jiang, Y Wang, Y Hao, L Juan, M Teng, X Zhang, M Li, G Wang, Y Liu
Nucleic acids research 37 (suppl_1), D98-D104, 2009
15672009
Novel specific microRNA biomarkers in idiopathic inflammatory bowel disease unrelated to disease activity
J Lin, NC Welker, Z Zhao, Y Li, J Zhang, SA Reuss, X Zhang, H Lee, Y Liu, ...
Modern Pathology 27 (4), 602-608, 2014
962014
DDIG-in: discriminating between disease-associated and neutral non-frameshifting micro-indels
H Zhao, Y Yang, H Lin, X Zhang, M Mort, DN Cooper, Y Liu, Y Zhou
Genome biology 14, 1-13, 2013
752013
Activation of CpxRA in Haemophilus ducreyi primarily inhibits the expression of its targets, including major virulence determinants
D Gangaiah, X Zhang, KR Fortney, B Baker, Y Liu, RS Munson Jr, ...
Journal of bacteriology 195 (15), 3486-3502, 2013
452013
DksA and (p) ppGpp have unique and overlapping contributions to Haemophilus ducreyi pathogenesis in humans
CL Holley, X Zhang, KR Fortney, S Ellinger, P Johnson, B Baker, Y Liu, ...
Infection and immunity 83 (8), 3281-3292, 2015
352015
Impact of human pathogenic micro-insertions and micro-deletions on post-transcriptional regulation
X Zhang, H Lin, H Zhao, Y Hao, M Mort, DN Cooper, Y Zhou, Y Liu
Human molecular genetics 23 (11), 3024-3034, 2014
352014
HrrF is the Fur-regulated small RNA in nontypeable Haemophilus influenzae
EA Santana, A Harrison, X Zhang, BD Baker, BJ Kelly, P White, Y Liu, ...
PLoS One 9 (8), e105644, 2014
262014
regSNPs-splicing: a tool for prioritizing synonymous single-nucleotide substitution
X Zhang, M Li, H Lin, X Rao, W Feng, Y Yang, M Mort, DN Cooper, ...
Human genetics 136, 1279-1289, 2017
252017
Haemophilus ducreyi Hfq contributes to virulence gene regulation as cells enter stationary phase
D Gangaiah, M Labandeira-Rey, X Zhang, KR Fortney, S Ellinger, ...
MBio 5 (1), 10.1128/mbio. 01081-13, 2014
222014
ExonImpact: prioritizing pathogenic alternative splicing events
M Li, W Feng, X Zhang, Y Yang, K Wang, M Mort, DN Cooper, Y Wang, ...
Human mutation 38 (1), 16-24, 2017
162017
MHCRoBERTa: pan-specific peptide–MHC class I binding prediction through transfer learning with label-agnostic protein sequences
F Wang, H Wang, L Wang, H Lu, S Qiu, T Zang, X Zhang, Y Hu
Briefings in Bioinformatics 23 (3), bbab595, 2022
142022
Haemophilus ducreyi seeks alternative carbon sources and adapts to nutrient stress and anaerobiosis during experimental infection of human volunteers
D Gangaiah, X Zhang, B Baker, KR Fortney, H Gao, CL Holley, ...
Infection and immunity 84 (5), 1514-1525, 2016
132016
Novel microRNA signature to differentiate ulcerative colitis from Crohn disease: a genome-wide study using next generation sequencing
J Lin, X Zhang, Z Zhao, N C Welker, Y Li, Y Liu, M P Bronner
Microrna 5 (3), 222-229, 2016
122016
Haemophilus ducreyi RpoE and CpxRA appear to play distinct yet complementary roles in regulation of envelope-related functions
D Gangaiah, X Zhang, B Baker, KR Fortney, Y Liu, RS Munson Jr, ...
Journal of bacteriology 196 (23), 4012-4025, 2014
72014
Correcting imbalanced reads coverage in bacterialtranscriptome sequencing with extreme deep coverage
X Zhang, D Gangaiah, RS Munson Jr, SM Spinola, Y Liu
International Journal of Computational Biology and Drug Design 7 (2-3), 195-213, 2014
2014
Discriminating between disease-causing and neutral non-frameshifting micro-INDELs by support vector machines by means of integrated sequence-and structure-based features
H Zhao, Y Yang, H Lin, X Zhang, M Mort, DN Cooper, Y Liu, Y Zhou
Office of the Vice Chancellor for Research, 2013
2013
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