Variation in the microbiota of Ixodes ticks with regard to geography, species, and sex W Van Treuren, L Ponnusamy, RJ Brinkerhoff, A Gonzalez, CM Parobek, ... Applied and environmental microbiology 81 (18), 6200-6209, 2015 | 174 | 2015 |
SeekDeep: single-base resolution de novo clustering for amplicon deep sequencing NJ Hathaway, CM Parobek, JJ Juliano, JA Bailey Nucleic acids research 46 (4), e21-e21, 2017 | 113 | 2017 |
Plasmodium falciparum is evolving to escape malaria rapid diagnostic tests in Ethiopia SM Feleke, EN Reichert, H Mohammed, BG Brhane, K Mekete, H Mamo, ... Nature microbiology 6 (10), 1289-1299, 2021 | 88 | 2021 |
Drug-Resistance and Population Structure of Plasmodium falciparum Across the Democratic Republic of Congo Using High-Throughput Molecular Inversion Probes O Aydemir, M Janko, NJ Hathaway, R Verity, MK Mwandagalirwa, ... The Journal of infectious diseases 218 (6), 946-955, 2018 | 88 | 2018 |
Using Amplicon Deep Sequencing to Detect Genetic Signatures of Plasmodium vivax Relapse JT Lin, NJ Hathaway, DL Saunders, C Lon, S Balasubramanian, ... The Journal of infectious diseases 212 (6), 999-1008, 2015 | 81 | 2015 |
The Impact of Antimalarial Resistance on the Genetic Structure of Plasmodium falciparum in the DRC RJ Verity, O Aydemir, NF Brazeau, OJ Watson, NJ Hathaway, ... bioRxiv, 656561, 2019 | 70 | 2019 |
Sex-based differences in clearance of chronic Plasmodium falciparum infection JJ Briggs, N Teyssier, JI Nankabirwa, J Rek, P Jagannathan, E Arinatiwe, ... medRxiv, 2020 | 65 | 2020 |
A novel CRISPR-based malaria diagnostic capable of Plasmodium detection, species differentiation, and drug-resistance genotyping CH Cunningham, CM Hennelly, JT Lin, R Ubalee, RM Boyce, EM Mulogo, ... EBioMedicine 68, 103415, 2021 | 56 | 2021 |
A deep sequencing approach to estimate Plasmodium falciparum complexity of infection (COI) and explore apical membrane antigen 1 diversity RH Miller, NJ Hathaway, O Kharabora, K Mwandagalirwa, A Tshefu, ... Malaria journal 16 (1), 490, 2017 | 49 | 2017 |
Differing patterns of selection and geospatial genetic diversity within two leading Plasmodium vivax candidate vaccine antigens CM Parobek, JA Bailey, NJ Hathaway, D Socheat, WO Rogers, JJ Juliano PLoS Negl Trop Dis 8 (4), e2796, 2014 | 49 | 2014 |
Sensitive, highly multiplexed sequencing of microhaplotypes from the Plasmodium falciparum heterozygome SK Tessema, NJ Hathaway, NB Teyssier, M Murphy, A Chen, O Aydemir, ... bioRxiv, 2020 | 47 | 2020 |
A deep sequencing tool for partitioning clearance rates following antimalarial treatment in polyclonal infections N Mideo, JA Bailey, NJ Hathaway, B Ngasala, DL Saunders, C Lon, ... Evolution, medicine, and public health 2016 (1), 21-36, 2016 | 44 | 2016 |
Increased risk of low birth weight in women with placental malaria associated with P. falciparum VAR2CSA clade JC Patel, NJ Hathaway, CM Parobek, KL Thwai, M Madanitsa, ... Scientific reports 7 (1), 1-12, 2017 | 41 | 2017 |
Surveillance for sulfadoxine-pyrimethamine resistant malaria parasites in the Lake and Southern Zones, Tanzania, using pooling and next-generation sequencing JM Ngondi, DS Ishengoma, SM Doctor, KL Thwai, C Keeler, S Mkude, ... Malaria journal 16 (1), 236, 2017 | 37 | 2017 |
Reuse of malaria rapid diagnostic tests for amplicon deep sequencing to estimate Plasmodium falciparum transmission intensity in western Uganda RM Boyce, N Hathaway, T Fulton, R Reyes, M Matte, M Ntaro, E Mulogo, ... Scientific reports 8 (1), 10159, 2018 | 25 | 2018 |
Antimalarial drug resistance profiling of Plasmodium falciparum infections in Ghana using molecular inversion probes and next generation sequencing. BA Mensah, O Aydemir, JL Myers-Hansen, M Opoku, NJ Hathaway, ... Antimicrobial Agents and Chemotherapy, 2020 | 23 | 2020 |
Plasmodium falciparum genetic variation of var2csa in the Democratic Republic of the Congo R Verity, NJ Hathaway, A Waltmann, SM Doctor, OJ Watson, JC Patel, ... Malaria journal 17 (1), 46, 2018 | 19 | 2018 |
Longitudinal pooled deep sequencing of the Plasmodium vivax K12 kelch gene in Cambodia reveals a lack of selection by artemisinin NF Brazeau, N Hathaway, CM Parobek, JT Lin, JA Bailey, C Lon, ... The American journal of tropical medicine and hygiene 95 (6), 1409-1412, 2016 | 12 | 2016 |
Characterization of Triatomine Bloodmeal Sources Using Direct Sanger Sequencing and Amplicon Deep Sequencing Methods S Balasubramanian, R Curtis-Robles, B Chirra, LD Auckland, A Mai, ... | 10 | 2021 |
Pooled Deep Sequencing of Drug Resistance Loci from Plasmodium falciparum Parasites across Ethiopia NF Brazeau, A Assefa, H Mohammed, H Seme, AG Tsadik, JB Parr, ... The American journal of tropical medicine and hygiene 101 (5), 1139-1143, 2019 | 8 | 2019 |