| COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms M Ostaszewski, A Niarakis, A Mazein, I Kuperstein, R Phair, ... Molecular systems biology 17 (10), e10387, 2021 | 80 | 2021 |
| Drug repurposing for COVID-19 using machine learning and mechanistic models of signal transduction circuits related to SARS-CoV-2 infection C Loucera, M Esteban-Medina, K Rian, MM Falco, J Dopazo, ... Signal transduction and targeted therapy 5 (1), 290, 2020 | 59 | 2020 |
| Differential metabolic activity and discovery of therapeutic targets using summarized metabolic pathway models C Çubuk, MR Hidalgo, A Amadoz, K Rian, F Salavert, MA Pujana, ... NPJ systems biology and applications 5 (1), 7, 2019 | 34 | 2019 |
| Using mechanistic models for the clinical interpretation of complex genomic variation M Peña-Chilet, M Esteban-Medina, MM Falco, K Rian, MR Hidalgo, ... Scientific reports 9 (1), 18937, 2019 | 23 | 2019 |
| Mechanistic modeling of the SARS-CoV-2 disease map K Rian, M Esteban-Medina, MR Hidalgo, C Çubuk, MM Falco, C Loucera, ... BioData mining 14, 1-8, 2021 | 22 | 2021 |
| Cell‐to‐cell and type‐to‐type heterogeneity of signaling networks: insights from the crowd A Gabor, M Tognetti, A Driessen, J Tanevski, B Guo, W Cao, H Shen, T Yu, ... Molecular systems biology 17 (10), e10402, 2021 | 14 | 2021 |
| Genome-scale mechanistic modeling of signaling pathways made easy: A bioconductor/cytoscape/web server framework for the analysis of omic data K Rian, MR Hidalgo, C Çubuk, MM Falco, C Loucera, M Esteban-Medina, ... Computational and Structural Biotechnology Journal 19, 2968-2978, 2021 | 12 | 2021 |
| A versatile and interoperable computational framework for the analysis and modeling of COVID-19 disease mechanisms A Niarakis, M Ostaszewski, A Mazein, I Kuperstein, M Kutmon, ... bioRxiv, 2022.12. 17.520865, 2022 | 1 | 2022 |
| Drug-target identification in COVID-19 disease mechanisms using computational systems biology approaches A Niarakis, M Ostaszewski, A Mazein, I Kuperstein, M Kutmon, ... Frontiers in Immunology 14, 1282859, 2024 | | 2024 |
| The mechanistic functional landscape of retinitis pigmentosa: a machine learning-driven approach to therapeutic target discovery M Esteban-Medina, C Loucera, K Rian, S Velasco, L Olivares-González, ... Journal of Translational Medicine 22 (1), 139, 2024 | | 2024 |
| A versatile and interoperable computational framework for the analysis and modeling of COVID-19 disease mechanisms (preprint) A Niarakis, M Ostaszewski, A Mazein, I Kuperstein, ME Gillespie, ... | | 2022 |
| Mechanistic modeling of the SARS-CoV-2 disease map (preprint) K Rian, M Esteban-Medina, MR Hidalgo, C Cubuk, MM Falco, C Loucera, ... | | 2020 |
| Extraction de motifs dans des matrices binaires issues des données génétique K RIAN | | 2016 |
Joaquin DopazoComputational Medicine Platform, FPS, Hospital Virgen del Rocio, Sevilla, SpainVerified email at juntadeandalucia.es
