Dissemination of cephalosporin resistance genes between Escherichia coli strains from farm animals and humans by specific plasmid lineages M de Been, VF Lanza, M de Toro, J Scharringa, W Dohmen, Y Du, J Hu, ... PLoS Genet 10 (12), e1004776, 2014 | 233 | 2014 |
Plasmid flux in Escherichia coli ST131 sublineages, analyzed by plasmid constellation network (PLACNET), a new method for plasmid reconstruction from whole genome sequences VF Lanza, M de Toro, MP Garcillán-Barcia, A Mora, J Blanco, TM Coque, ... PLoS Genet 10 (12), e1004766, 2014 | 136 | 2014 |
Four main virotypes among extended-spectrum-β-lactamase-producing isolates of Escherichia coli O25b: H4-B2-ST131: bacterial, epidemiological, and clinical characteristics J Blanco, A Mora, R Mamani, C López, M Blanco, G Dahbi, A Herrera, ... Journal of clinical microbiology 51 (10), 3358-3367, 2013 | 86 | 2013 |
The Plasmidome of Firmicutes: Impact on the Emergence and the Spread of Resistance to Antimicrobials VF Lanza, AP Tedim, JL Martínez, F Baquero, TM Coque Plasmids: Biology and impact in biotechnology and discovery, 379-419, 2015 | 69 | 2015 |
In-depth resistome analysis by targeted metagenomics VF Lanza, F Baquero, JL Martínez, R Ramos-Ruíz, B González-Zorn, ... Microbiome 6 (1), 1-14, 2018 | 58 | 2018 |
Public health evolutionary biology of antimicrobial resistance: priorities for intervention F Baquero, VF Lanza, R Cantón, TM Coque Evolutionary applications 8 (3), 223-239, 2015 | 55 | 2015 |
PipX, the coactivator of NtcA, is a global regulator in cyanobacteria J Espinosa, F Rodríguez-Mateos, P Salinas, VF Lanza, R Dixon, ... Proceedings of the National Academy of Sciences 111 (23), E2423-E2430, 2014 | 55 | 2014 |
PLACNETw: a web-based tool for plasmid reconstruction from bacterial genomes L Vielva, M de Toro, VF Lanza, F de la Cruz Bioinformatics 33 (23), 3796-3798, 2017 | 52 | 2017 |
Prediction of the intestinal resistome by a three-dimensional structure-based method E Ruppé, A Ghozlane, J Tap, N Pons, AS Alvarez, N Maziers, T Cuesta, ... Nature microbiology 4 (1), 112-123, 2019 | 50 | 2019 |
Genomic and metagenomic technologies to explore the antibiotic resistance mobilome JL Martínez, TM Coque, VF Lanza, F de la Cruz, F Baquero Annals of the New York Academy of Sciences 1388 (1), 26-41, 2017 | 35 | 2017 |
AcCNET (Accessory Genome Constellation Network): comparative genomics software for accessory genome analysis using bipartite networks VF Lanza, F Baquero, F de la Cruz, TM Coque Bioinformatics 33 (2), 283-285, 2017 | 30 | 2017 |
The challenges of designing a benchmark strategy for bioinformatics pipelines in the identification of antimicrobial resistance determinants using next generation sequencing … A Angers-Loustau, M Petrillo, J Bengtsson-Palme, T Berendonk, B Blais, ... F1000Research 7, 2018 | 23 | 2018 |
Long-term clonal dynamics of Enterococcus faecium strains causing bloodstream infections (1995–2015) in Spain AP Tedim, P Ruíz-Garbajosa, MC Rodríguez, M Rodríguez-Baños, ... Journal of Antimicrobial Chemotherapy 72 (1), 48-55, 2016 | 23 | 2016 |
Co-diversification of Enterococcus faecium core genomes and PBP5: evidences of pbp5 horizontal transfer C Novais, AP Tedim, VF Lanza, AR Freitas, E Silveira, R Escada, ... Frontiers in microbiology 7, 1581, 2016 | 22 | 2016 |
Microcins in Enterobacteriaceae: Peptide antimicrobials in the eco-active intestinal chemosphere F Baquero, VF Lanza, MR Baquero, R Del Campo, DA Bravo-Vázquez Frontiers in microbiology 10, 2261, 2019 | 21 | 2019 |
Membrane-associated nanomotors for macromolecular transport E Cabezon, VF Lanza, I Arechaga Current opinion in biotechnology 23 (4), 537-544, 2012 | 20 | 2012 |
The plasmidome of firmicutes: impact on the emergence and the spread of resistance to antimicrobials. Microbiol. Spectr. 3: PLAS–0039–2014. doi: 10.1128/microbiolspec VF Lanza, AP Tedim, JL Martínez, F Baquero, TM Coque, VF Lanza PLAS-0039-2014, 2015 | 15 | 2015 |
Gene transmission in the one health microbiosphere and the channels of antimicrobial resistance F Baquero, TM Coque, JL Martínez, S Aracil-Gisbert, VF Lanza Frontiers in microbiology 10, 2892, 2019 | 13 | 2019 |
Numbers on the edges: a simplified and scalable method for quantifying the gene regulation function R Fernandez‐Lopez, I Del Campo, R Ruiz, V Lanza, L Vielva, ... Bioessays 32 (4), 346-355, 2010 | 13 | 2010 |
Simulating multilevel dynamics of antimicrobial resistance in a membrane computing model M Campos, R Capilla, F Naya, R Futami, T Coque, A Moya, ... MBio 10 (1), 2019 | 11 | 2019 |