| Correlated mutations contain information about protein-protein interaction F Pazos, M Helmer-Citterich, G Ausiello, A Valencia Journal of molecular biology 271 (4), 511-523, 1997 | 671 | 1997 |
| Similarity of phylogenetic trees as indicator of protein–protein interaction F Pazos, A Valencia Protein engineering 14 (9), 609-614, 2001 | 651 | 2001 |
| Emerging methods in protein co-evolution D De Juan, F Pazos, A Valencia Nature Reviews Genetics 14 (4), 249-261, 2013 | 647 | 2013 |
| Computational methods for the prediction of protein interactions A Valencia, F Pazos Current opinion in structural biology 12 (3), 368-373, 2002 | 466 | 2002 |
| Prediction of protein–protein interaction sites in heterocomplexes with neural networks P Fariselli, F Pazos, A Valencia, R Casadio European Journal of Biochemistry 269 (5), 1356-1361, 2002 | 351 | 2002 |
| In silico two‐hybrid system for the selection of physically interacting protein pairs F Pazos, A Valencia Proteins: Structure, Function, and Bioinformatics 47 (2), 219-227, 2002 | 328 | 2002 |
| Automatic methods for predicting functionally important residues A del Sol Mesa, F Pazos, A Valencia Journal of molecular biology 326 (4), 1289-1302, 2003 | 249 | 2003 |
| EVA: continuous automatic evaluation of protein structure prediction servers VA Eyrich, MA Martı-Renom, D Przybylski, MS Madhusudhan, A Fiser, ... Bioinformatics 17 (12), 1242-1243, 2001 | 247 | 2001 |
| Automated prediction of protein function and detection of functional sites from structure F Pazos, MJE Sternberg Proceedings of the National Academy of Sciences 101 (41), 14754-14759, 2004 | 226 | 2004 |
| EVA: evaluation of protein structure prediction servers IYY Koh, VA Eyrich, MA Marti-Renom, D Przybylski, MS Madhusudhan, ... Nucleic Acids Research 31 (13), 3311-3315, 2003 | 219 | 2003 |
| Protein co‐evolution, co‐adaptation and interactions F Pazos, A Valencia The EMBO journal 27 (20), 2648-2655, 2008 | 213 | 2008 |
| Genetic polymorphisms among C57BL/6 mouse inbred strains E Zurita, M Chagoyen, M Cantero, R Alonso, A González-Neira, ... Transgenic research 20, 481-489, 2011 | 212 | 2011 |
| High-confidence prediction of global interactomes based on genome-wide coevolutionary networks D Juan, F Pazos, A Valencia Proceedings of the National Academy of Sciences 105 (3), 934-939, 2008 | 212 | 2008 |
| Breaking-Cas—interactive design of guide RNAs for CRISPR-Cas experiments for ENSEMBL genomes JC Oliveros, M Franch, D Tabas-Madrid, D San-León, L Montoliu, ... Nucleic acids research 44 (W1), W267-W271, 2016 | 206 | 2016 |
| MBROLE 2.0—functional enrichment of chemical compounds J López-Ibáñez, F Pazos, M Chagoyen Nucleic acids research 44 (W1), W201-W204, 2016 | 193 | 2016 |
| Protein interactions and ligand binding: from protein subfamilies to functional specificity A Rausell, D Juan, F Pazos, A Valencia Proceedings of the National Academy of Sciences 107 (5), 1995-2000, 2010 | 169 | 2010 |
| Assessing protein co-evolution in the context of the tree of life assists in the prediction of the interactome F Pazos, JAG Ranea, D Juan, MJE Sternberg Journal of molecular biology 352 (4), 1002-1015, 2005 | 163 | 2005 |
| MBRole: enrichment analysis of metabolomic data M Chagoyen, F Pazos Bioinformatics 27 (5), 730-731, 2011 | 159 | 2011 |
| Probe Compound for Detecting and Isolating Enzymes and Means and Methods Using the Same PN Golyshin, OV Golyshina, KN Timmis, T Chernikova, A Waliczek, ... US Patent App. 13/257,383, 2012 | 157 | 2012 |
| Towards the prediction of protein interaction partners using physical docking MN Wass, G Fuentes, C Pons, F Pazos, A Valencia Molecular systems biology 7 (1), 469, 2011 | 149 | 2011 |
