Michael T. Wolfinger
Michael T. Wolfinger
Principal Investigator at University of Vienna / RNAForecast CEO
Verified email at - Homepage
Cited by
Cited by
Barrier trees of degenerate landscapes
C Flamm, IL Hofacker, PF Stadler, MT Wolfinger
Zeitschrift für Physikalische Chemie 216 (2), 155, 2002
Genomic epidemiology of superspreading events in Austria reveals mutational dynamics and transmission properties of SARS-CoV-2
A Popa, JW Genger, MD Nicholson, T Penz, D Schmid, SW Aberle, ...
Science Translational Medicine 12 (573), 2020
Efficient computation of RNA folding dynamics
MT Wolfinger, WA Svrcek-Seiler, C Flamm, IL Hofacker, PF Stadler
Journal of Physics A: Mathematical and General 37 (17), 4731, 2004
Predicting RNA secondary structures from sequence and probing data
R Lorenz, MT Wolfinger, A Tanzer, IL Hofacker
Methods 103, 86-98, 2016
SHAPE directed RNA folding
R Lorenz, D Luntzer, IL Hofacker, PF Stadler, MT Wolfinger
Bioinformatics 32 (1), 145-147, 2016
Folding kinetics of large RNAs
M Geis, C Flamm, MT Wolfinger, A Tanzer, IL Hofacker, M Middendorf, ...
Journal of Molecular Biology 379 (1), 160-173, 2008
Interplay between the catabolite repression control protein Crc, Hfq and RNA in Hfq-dependent translational regulation in Pseudomonas aeruginosa
E Sonnleitner, A Wulf, S Campagne, XY Pei, MT Wolfinger, G Forlani, ...
Nucleic acids research 46 (3), 1470-1485, 2018
TSSAR: TSS annotation regime for dRNA-seq data
F Amman, MT Wolfinger, R Lorenz, IL Hofacker, PF Stadler, S Findeiß
BMC Bioinformatics 15 (1), 1-11, 2014
Differential transcriptional responses to Ebola and Marburg virus infection in bat and human cells
M Hölzer, V Krähling, F Amman, E Barth, SH Bernhart, VAO Carmelo, ...
Scientific Reports 6 (1), 1-17, 2016
BarMap: RNA folding on dynamic energy landscapes
IL Hofacker, C Flamm, C Heine, MT Wolfinger, G Scheuermann, ...
RNA 16 (7), 1308-1316, 2010
Functional RNA structures in the 3′ UTR of tick-borne, insect-specific and no-known-vector flaviviruses
R Ochsenreiter, IL Hofacker, MT Wolfinger
Viruses 11 (3), 298, 2019
The MazF-regulon: a toolbox for the post-transcriptional stress response in Escherichia coli
M Sauert, MT Wolfinger, O Vesper, C Müller, K Byrgazov, I Moll
Nucleic Acids Research 44 (14), 6660-6675, 2016
RNASeq Based Transcriptional Profiling of Pseudomonas aeruginosa PA14 after Short- and Long-Term Anoxic Cultivation in Synthetic Cystic Fibrosis Sputum …
M Tata, MT Wolfinger, F Amman, N Roschanski, A Dötsch, E Sonnleitner, ...
PLoS One 11 (1), e0147811, 2016
NMR structural profiling of transcriptional intermediates reveals riboswitch regulation by metastable RNA conformations
C Helmling, A Wacker, MT Wolfinger, IL Hofacker, M Hengesbach, ...
Journal of the American Chemical Society 139 (7), 2647-2656, 2017
General and microRNA-mediated mRNA degradation occurs on ribosome complexes in Drosophila cells
S Antic, MT Wolfinger, A Skucha, S Hosiner, S Dorner
Molecular and Cellular Biology 35 (13), 2309-2320, 2015
Exact folding dynamics of RNA secondary structures
MT Wolfinger, WA Svrcek-Seiler, C Flamm, IL Hofacker, PF Stadler
J. Phys. A: Math 37, 4731-4741, 2004
Cross-regulation by CrcZ RNA controls anoxic biofilm formation in Pseudomonas aeruginosa
P Pusic, M Tata, MT Wolfinger, E Sonnleitner, S Häussler, U Bläsi
Scientific Reports 6 (1), 1-8, 2016
Updated phylogeny of chikungunya virus suggests lineage-specific RNA architecture
A de Bernardi Schneider, R Ochsenreiter, R Hostager, IL Hofacker, ...
Viruses 11 (9), 798, 2019
ViennaNGS: A toolbox for building efficient next-generation sequencing analysis pipelines
MT Wolfinger, J Fallmann, F Eggenhofer, F Amman
F1000Research 4, 2015
Exploring the lower part of discrete polymer model energy landscapes
MT Wolfinger, S Will, IL Hofacker, R Backofen, PF Stadler
Europhysics Letters 74 (4), 726, 2006
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