Flux-based transport enhancement as a plausible unifying mechanism for auxin transport in meristem development S Stoma, M Lucas, J Chopard, M Schaedel, J Traas, C Godin PLoS computational biology 4 (10), e1000207, 2008 | 170 | 2008 |
Hypoxia induces a HIF-1-dependent transition from collective-to-amoeboid dissemination in epithelial cancer cells S Lehmann, V Te Boekhorst, J Odenthal, R Bianchi, S van Helvert, ... Current Biology 27 (3), 392-400, 2017 | 75 | 2017 |
Modeling dynamics of cell-to-cell variability in TRAIL-induced apoptosis explains fractional killing and predicts reversible resistance F Bertaux, S Stoma, D Drasdo, G Batt PLoS Comput Biol 10 (10), e1003893, 2014 | 61 | 2014 |
In vivo fluorescence imaging of the activity of CEA TCB, a novel T-cell bispecific antibody, reveals highly specific tumor targeting and fast induction of T-cell–mediated tumor … S Lehmann, R Perera, HP Grimm, J Sam, S Colombetti, T Fauti, L Fahrni, ... Clinical Cancer Research 22 (17), 4417-4427, 2016 | 53 | 2016 |
Quantitative spatial analysis of haematopoiesis-regulating stromal cells in the bone marrow microenvironment by 3D microscopy A Gomariz, PM Helbling, S Isringhausen, U Suessbier, A Becker, A Boss, ... Nature communications 9 (1), 1-15, 2018 | 45 | 2018 |
Bridging the gaps in systems biology M Cvijovic, J Almquist, J Hagmar, S Hohmann, HM Kaltenbach, E Klipp, ... Molecular Genetics and Genomics 289 (5), 727-734, 2014 | 43 | 2014 |
Long-term tracking of budding yeast cells in brightfield microscopy: CellStar and the Evaluation Platform C Versari, S Stoma, K Batmanov, A Llamosi, F Mroz, A Kaczmarek, ... Journal of The Royal Society Interface 14 (127), 20160705, 2017 | 35 | 2017 |
VEGF-A regulates cellular localization of SR-BI as well as transendothelial transport of HDL but not LDL S Velagapudi, M Yalcinkaya, A Piemontese, R Meier, SF Nørrelykke, ... Arteriosclerosis, thrombosis, and vascular biology 37 (5), 794-803, 2017 | 31 | 2017 |
AutoTube: a novel software for the automated morphometric analysis of vascular networks in tissues JA Montoya-Zegarra, E Russo, P Runge, M Jadhav, AH Willrodt, S Stoma, ... Angiogenesis 22 (2), 223-236, 2019 | 29 | 2019 |
STL-based analysis of TRAIL-induced apoptosis challenges the notion of type I/type II cell line classification S Stoma, A Donzé, F Bertaux, O Maler, G Batt PLoS Comput Biol 9 (5), e1003056, 2013 | 29 | 2013 |
Using mechanics in the modelling of meristem morphogenesis S Stoma, J Chopard, C Godin, J Traas 5th International Workshop on functional-structural plant models, 52, 1--4, 2007 | 10 | 2007 |
Integrating adaptation mechanisms using control theory centric architecture models: A case study F Křikava, P Collet, R Rouvoy 11th International Conference on Autonomic Computing ({ICAC} 14), 25-32, 2014 | 9 | 2014 |
STSE: Spatio-temporal simulation environment dedicated to biology S Stoma, M Fröhlich, S Gerber, E Klipp BMC bioinformatics 12 (1), 1-11, 2011 | 9 | 2011 |
Defining modeling strategies for Systems Biology J Stelling, P Mendes, F Tonin, E Klipp, R Zecchina, M Heinemann, ... Report, FutureSysBio Workshop, Göteborg, Sweden, 2011 | 4 | 2011 |
OpenAlea: An open-source platform for the integration of heterogeneous FSPM components S Dufour-Kowalski, C Pradal, N Dones, PB de Reuille, F Boudon, ... FSPM07-5th International Workshop on Functional-Structural Plant Models, P36 …, 2007 | 4 | 2007 |
The U2-spliceosome and its interactors regulate the levels and activity of the LDL receptor in humans P Zanoni, G Panteloglou, A Othman, JT Haas, R Meier, A Rimbert, ... Atherosclerosis 315, e15, 2020 | | 2020 |
Spatial analysis of the bone marrow stroma using deep learning A Gomariz, S Isringhausen, P Helbling, U Suessbier, A Becker, A Boss, ... SWISS MEDICAL WEEKLY 148, 25S-25S, 2018 | | 2018 |
Multiscale image-based quantitative analysis of bone marrow stromal network topology reveals strict spatial constraints for hematopoietic-stromal cellular interactions A Gomariz, P Helbling, S Isringhausen, U Suessbier, A Becker, A Boss, ... HAEMATOLOGICA 102, 78-79, 2017 | | 2017 |
A Software Tool for Automated Analysis of in vitro Lymphatic Endothelial Cell Tube Formation P Runge, J Montoya, P Schineis, S Stoma, S Noerrelykke, M Detmar, ... JOURNAL OF VASCULAR RESEARCH 54, 49-50, 2017 | | 2017 |
Spatio-Temporal Simulation Environment: A Microscopy Image Based Modelization Framework S Stoma, E Klipp Microscopy and Microanalysis 16 (S2), 734-735, 2010 | | 2010 |