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Juan Carlos Rivera-Mulia
Juan Carlos Rivera-Mulia
Department of Biochemistry, Molecular Biology and Biophysics University of Minnesota Medical School
Verified email at umn.edu - Homepage
Title
Cited by
Cited by
Year
Expanded encyclopaedias of DNA elements in the human and mouse genomes
JE Moore, MJ Purcaro, HE Pratt, CB Epstein, N Shoresh, J Adrian, T Kawli, ...
Nature 583 (7818), 699-710, 2020
11362020
Integrative detection and analysis of structural variation in cancer genomes
JR Dixon, J Xu, V Dileep, Y Zhan, F Song, VT Le, GG Yardımcı, ...
Nature genetics 50 (10), 1388-1398, 2018
3102018
Identifying cis elements for spatiotemporal control of mammalian DNA replication
J Sima, A Chakraborty, V Dileep, M Michalski, KN Klein, NP Holcomb, ...
Cell 176 (4), 816-830. e18, 2019
1632019
Dynamic changes in replication timing and gene expression during lineage specification of human pluripotent stem cells
JC Rivera-Mulia, Q Buckley, T Sasaki, J Zimmerman, RA Didier, K Nazor, ...
Genome research 25 (8), 1091-1103, 2015
1532015
Genome-wide analysis of replication timing by next-generation sequencing with E/L Repli-seq
C Marchal, T Sasaki, D Vera, K Wilson, J Sima, JC Rivera-Mulia, ...
Nature protocols 13 (5), 819-839, 2018
1452018
4D genome rewiring during oncogene-induced and replicative senescence
S Sati, B Bonev, Q Szabo, D Jost, P Bensadoun, F Serra, V Loubiere, ...
Molecular cell 78 (3), 522-538. e9, 2020
1202020
Replication timing and transcriptional control: beyond cause and effect—part III
JC Rivera-Mulia, DM Gilbert
Current opinion in cell biology 40, 168-178, 2016
1082016
An integrative ENCODE resource for cancer genomics
J Zhang, D Lee, V Dhiman, P Jiang, J Xu, P McGillivray, H Yang, J Liu, ...
Nature communications 11 (1), 3696, 2020
1032020
Perspectives on ENCODE
MRM Snyder MP, Gingeras TR, Moore JE, Weng Z, Gerstein MB, Ren B, Hardison ...
Nature 583 (7818), 693-698, 2020
103*2020
Replicating large genomes: divide and conquer
JC Rivera-Mulia, DM Gilbert
Molecular cell 62 (5), 756-765, 2016
982016
Copy number variation is a fundamental aspect of the placental genome
RL Hannibal, EB Chuong, JC Rivera-Mulia, DM Gilbert, A Valouev, ...
PLoS genetics 10 (5), e1004290, 2014
772014
Allele-specific control of replication timing and genome organization during development
JC Rivera-Mulia, A Dimond, D Vera, C Trevilla-Garcia, T Sasaki, ...
Genome research 28 (6), 800-811, 2018
722018
Large-scale chromatin structure–function relationships during the cell cycle and development: insights from replication timing
V Dileep, JC Rivera-Mulia, J Sima, DM Gilbert
Cold Spring Harbor symposia on quantitative biology 80, 53-63, 2015
692015
3D genome organization contributes to genome instability at fragile sites
D Sarni, T Sasaki, M Irony Tur-Sinai, K Miron, JC Rivera-Mulia, ...
Nature communications 11 (1), 3613, 2020
632020
DNA replication timing alterations identify common markers between distinct progeroid diseases
JC Rivera-Mulia, R Desprat, C Trevilla-Garcia, D Cornacchia, H Schwerer, ...
Proceedings of the National Academy of Sciences 114 (51), E10972-E10980, 2017
462017
DNA moves sequentially towards the nuclear matrix during DNA replication in vivo
JC Rivera-Mulia, R Hernández-Muñoz, F Martínez, A Aranda-Anzaldo
BMC cell biology 12, 1-16, 2011
442011
Stability of patient-specific features of altered DNA replication timing in xenografts of primary human acute lymphoblastic leukemia
T Sasaki, JC Rivera-Mulia, D Vera, J Zimmerman, S Das, M Padget, ...
Experimental hematology 51, 71-82. e3, 2017
372017
NIH SenNet Consortium to map senescent cells throughout the human lifespan to understand physiological health
Brown University TDA Wang Siyuan (Steven) 34, ...
Nature aging 2 (12), 1090-1100, 2022
332022
Determination of the in vivo structural DNA loop organization in the genomic region of the rat albumin locus by means of a topological approach
JC Rivera-Mulia, A Aranda-Anzaldo
DNA research 17 (1), 23-35, 2010
252010
Rapid irreversible transcriptional reprogramming in human stem cells accompanied by discordance between replication timing and chromatin compartment
V Dileep, KA Wilson, C Marchal, X Lyu, PA Zhao, B Li, A Poulet, ...
Stem cell reports 13 (1), 193-206, 2019
242019
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