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Yijia Xiao
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Benchmarking foundation models with language-model-as-an-examiner
Y Bai, J Ying, Y Cao, X Lv, Y He, X Wang, J Yu, K Zeng, Y Xiao, H Lyu, ...
NeurIPS 2023 36, 2023
1262023
Modeling protein using large-scale pretrain language model
Y Xiao, J Qiu, Z Li, CY Hsieh, J Tang
KDD 2021, Pre-training LLM Workshop, 2021
312021
AgentReview: Exploring Peer Review Dynamics with LLM Agents
Y Jin, Q Zhao, Y Wang, H Chen, K Zhu, Y Xiao, J Wang
EMNLP 2024, 2024
242024
PrivacyMind: large language models can be contextual privacy protection learners
Y Xiao, Y Jin, Y Bai, Y Wu, X Yang, X Luo, W Yu, X Zhao, Y Liu, Q Gu, ...
EMNLP 2024, 2024
222024
Deconstructing the ethics of large language models from long-standing issues to new-emerging dilemmas
C Deng, Y Duan, X Jin, H Chang, Y Tian, H Liu, HP Zou, Y Jin, Y Xiao, ...
arXiv e-prints, arXiv: 2406.05392, 2024
132024
Logicvista: Multimodal llm logical reasoning benchmark in visual contexts
Y Xiao, E Sun, T Liu, W Wang
arXiv preprint arXiv:2407.04973, 2024
122024
ProteinGPT: Multimodal LLM for Protein Property Prediction and Structure Understanding
Y Xiao, E Sun, Y Jin, Q Wang, W Wang
arXiv preprint arXiv:2408.11363, 2024
102024
SPLDExtraTrees: robust machine learning approach for predicting kinase inhibitor resistance
ZY Yang, ZF Ye, YJ Xiao, CY Hsieh, SY Zhang
Briefings in Bioinformatics 23 (3), bbac050, 2022
102022
Benchmarking Foundation Models with Language-Model-as-an-Examiner. CoRR abs/2306.04181 (2023)
Y Bai, J Ying, Y Cao, X Lv, Y He, X Wang, J Yu, K Zeng, Y Xiao, H Lyu, ...
NeurIPS 2023 36 10, 2023
62023
Geneverse: A collection of Open-source Multimodal Large Language Models for Genomic and Proteomic Research
T Liu, Y Xiao, X Luo, H Xu, WJ Zheng, H Zhao
EMNLP 2024, 2024
32024
A deep learning inference scheme based on pipelined matrix multiplication acceleration design and non-uniform quantization
Y Zhang, DH Leung, M Guo, Y Xiao, H Liu, Y Li, J Zhang, G Wang, Z Chen
2021 IEEE 7th International Conference on Cloud Computing and Intelligent …, 2021
32021
Memorize and rank: Elevating large language models for clinical diagnosis prediction
MD Ma, X Wang, Y Xiao, A Cuturrufo, VS Nori, E Halperin, W Wang
arXiv preprint arXiv:2501.17326, 2025
22025
RNA-GPT: Multimodal Generative System for RNA Sequence Understanding
Y Xiao, E Sun, Y Jin, W Wang
NeurIPS 2024, Machine Learning for Structural Biology Workshop, 2024
22024
Memorize and rank: Enabling large language models for medical event prediction
MD Ma, Y Xiao, A Cuturrufo, X Wang, W Wang
AAAI 2024 Spring Symposium on Clinical Foundation Models, 2024
22024
PGraphDTA: Improving Drug Target Interaction Prediction using Protein Language Models and Contact Maps
R Bal, Y Xiao, W Wang
AI for Science Workshop, Neurips, 2023
22023
Protein Large Language Models: A Comprehensive Survey
Y Xiao, W Zhao, J Zhang, Y Jin, H Zhang, Z Ren, R Sun, H Wang, G Wan, ...
arXiv preprint arXiv:2502.17504, 2025
12025
Deconstructing The Ethics of Large Language Models from Long-standing Issues to New-emerging Dilemmas: A Survey
C Deng, Y Duan, X Jin, H Chang, Y Tian, H Liu, Y Wang, K Gao, HP Zou, ...
arXiv preprint arXiv:2406.05392, 2024
12024
Know2BIO: A Comprehensive Dual-View Benchmark for Evolving Biomedical Knowledge Graphs
Y Xiao, D Steinecke, AR Pelletier, Y Bai, P Ping, W Wang
arXiv preprint arXiv:2310.03221, 2023
12023
CSR-Bench: Benchmarking LLM Agents in Deployment of Computer Science Research Repositories
Y Xiao, R Wang, L Kong, D Golac, W Wang
arXiv preprint arXiv:2502.06111, 2025
2025
TradingAgents: Multi-Agents LLM Financial Trading Framework
Y Xiao, E Sun, D Luo, W Wang
AAAI 2025 @ Multi-Agent AI in the Real World, 2025
2025
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