| Proteogenomic characterization reveals therapeutic vulnerabilities in lung adenocarcinoma MA Gillette, S Satpathy, S Cao, SM Dhanasekaran, SV Vasaikar, K Krug, ... Cell 182 (1), 200-225. e35, 2020 | 448 | 2020 |
| Proteogenomic characterization of endometrial carcinoma Y Dou, EA Kawaler, DC Zhou, MA Gritsenko, C Huang, L Blumenberg, ... Cell 180 (4), 729-748. e26, 2020 | 321 | 2020 |
| Proteogenomic landscape of breast cancer tumorigenesis and targeted therapy K Krug, EJ Jaehnig, S Satpathy, L Blumenberg, A Karpova, M Anurag, ... Cell 183 (5), 1436-1456. e31, 2020 | 306 | 2020 |
| Capturing the onset of PRC2-mediated repressive domain formation O Oksuz, V Narendra, CH Lee, N Descostes, G LeRoy, R Raviram, ... Molecular cell 70 (6), 1149-1162. e5, 2018 | 236 | 2018 |
| Melanoma-secreted amyloid beta suppresses neuroinflammation and promotes brain metastasis K Kleffman, G Levinson, IVL Rose, LM Blumenberg, SAA Shadaloey, ... Cancer discovery 12 (5), 1314-1335, 2022 | 45 | 2022 |
| miRNAs are essential for the regulation of the PI3K/AKT/FOXO pathway and receptor editing during B cell maturation M Coffre, D Benhamou, D Rieß, L Blumenberg, V Snetkova, MJ Hines, ... Cell reports 17 (9), 2271-2285, 2016 | 43 | 2016 |
| Phylogenetic analysis of algal symbionts associated with four North American amphibian egg masses E Kim, Y Lin, R Kerney, L Blumenberg, C Bishop PLoS One 9 (11), e108915, 2014 | 35 | 2014 |
| Hyperactive CDK2 activity in basal-like breast cancer imposes a genome integrity liability that can be exploited by targeting DNA polymerase ε VO Sviderskiy, L Blumenberg, E Gorodetsky, TR Karakousi, N Hirsh, ... Molecular cell 80 (4), 682-698. e7, 2020 | 27 | 2020 |
| Clinical Proteomic Tumor Analysis Consortium Proteogenomic characterization reveals therapeutic vulnerabilities in lung adenocarcinoma MA Gillette, S Satpathy, S Cao, SM Dhanasekaran, SV Vasaikar, K Krug, ... Cell 182 (1), 200-225, 2020 | 18 | 2020 |
| Hypercluster: a flexible tool for parallelized unsupervised clustering optimization L Blumenberg, KV Ruggles BMC bioinformatics 21, 1-7, 2020 | 14 | 2020 |
| BlackSheep: A Bioconductor and Bioconda package for differential extreme value analysis L Blumenberg, EA Kawaler, MI Cornwell, S Smith, KV Ruggles, D Fenyo Journal of Proteome Research 20 (7), 3767-3773, 2021 | 13 | 2021 |
| Impaired expression of rearranged immunoglobulin genes and premature p53 activation block B cell development in BMI1 null mice DJ Cantor, B King, L Blumenberg, T DiMauro, I Aifantis, SB Koralov, ... Cell reports 26 (1), 108-118. e4, 2019 | 9 | 2019 |
| The conserved ATM kinase RAG2-S365 phosphorylation site limits cleavage events in individual cells independent of any repair defect SL Hewitt, JB Wong, JH Lee, M Nishana, H Chen, M Coussens, SM Arnal, ... Cell reports 21 (4), 979-993, 2017 | 7 | 2017 |
| Rapid TCR: Epitope Ranker (RAPTER): a primary human T cell reactivity screening assay pairing epitope and TCR at single cell resolution RP Deering, L Blumenberg, L Li, A Dhanik, S Jeong, S Pourpe, H Song, ... Scientific Reports 13 (1), 8452, 2023 | 2 | 2023 |
| Computational methods for the integrative analysis and interpretation of multi-omic cancer data L Blumenberg New York University, 2020 | 1 | 2020 |
| RAG off-target activity is in the loop L Blumenberg, JA Skok Trends in molecular medicine 21 (12), 733-735, 2015 | 1 | 2015 |
| PhosphoDisco: A Toolkit for Co-regulated Phosphorylation Module Discovery in Phosphoproteomic Data T Schraink, L Blumenberg, G Hussey, S George, B Miller, N Mathew, ... Molecular & Cellular Proteomics 22 (8), 2023 | | 2023 |
| Abstract LB052: Melanoma-secreted amyloid beta suppresses neuroinflammation and promotes brain metastasis K Kleffman, G Levinson, IV Rose, L Blumenberg, SA Shadaloey, ... Cancer Research 82 (12_Supplement), LB052-LB052, 2022 | | 2022 |
| P03. 07 Analysis of scRNAseq from the human thymus nominates genes potentially missing from central tolerance of cytotoxic T cells L Blumenberg, G Atwal, A Dhanik Journal for ImmunoTherapy of Cancer 9 (Suppl 1), 2021 | | 2021 |
| Rigorous estimation of post-translational proteasomal splicing in the immunopeptidome KJ Cygan, E Khaledian, L Blumenberg, RR Salzler, D Shah, W Olson, ... bioRxiv, 2021.05. 26.445792, 2021 | | 2021 |
